Issue #22445: PyBuffer_IsContiguous() now implements precise contiguity

tests, compatible with NumPy's NPY_RELAXED_STRIDES_CHECKING compilation
flag.  Previously the function reported false negatives for corner cases.
This commit is contained in:
Stefan Krah 2015-02-01 14:53:54 +01:00
parent a5e1dbef14
commit 363af44a4a
4 changed files with 90 additions and 29 deletions

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@ -1007,6 +1007,7 @@ class TestBufferProtocol(unittest.TestCase):
# shape, strides, offset # shape, strides, offset
structure = ( structure = (
([], [], 0), ([], [], 0),
([1,3,1], [], 0),
([12], [], 0), ([12], [], 0),
([12], [-1], 11), ([12], [-1], 11),
([6], [2], 0), ([6], [2], 0),
@ -1078,6 +1079,18 @@ class TestBufferProtocol(unittest.TestCase):
self.assertRaises(BufferError, ndarray, ex, getbuf=PyBUF_ANY_CONTIGUOUS) self.assertRaises(BufferError, ndarray, ex, getbuf=PyBUF_ANY_CONTIGUOUS)
nd = ndarray(ex, getbuf=PyBUF_SIMPLE) nd = ndarray(ex, getbuf=PyBUF_SIMPLE)
# Issue #22445: New precise contiguity definition.
for shape in [1,12,1], [7,0,7]:
for order in 0, ND_FORTRAN:
ex = ndarray(items, shape=shape, flags=order|ND_WRITABLE)
self.assertTrue(is_contiguous(ex, 'F'))
self.assertTrue(is_contiguous(ex, 'C'))
for flags in requests:
nd = ndarray(ex, getbuf=flags)
self.assertTrue(is_contiguous(nd, 'F'))
self.assertTrue(is_contiguous(nd, 'C'))
def test_ndarray_exceptions(self): def test_ndarray_exceptions(self):
nd = ndarray([9], [1]) nd = ndarray([9], [1])
ndm = ndarray([9], [1], flags=ND_VAREXPORT) ndm = ndarray([9], [1], flags=ND_VAREXPORT)

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@ -1531,6 +1531,10 @@ Build
C API C API
----- -----
- Issue #22445: PyBuffer_IsContiguous() now implements precise contiguity
tests, compatible with NumPy's NPY_RELAXED_STRIDES_CHECKING compilation
flag. Previously the function reported false negatives for corner cases.
- Issue #22079: PyType_Ready() now checks that statically allocated type has - Issue #22079: PyType_Ready() now checks that statically allocated type has
no dynamically allocated bases. no dynamically allocated bases.

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@ -1510,6 +1510,19 @@ ndarray_getbuf(NDArrayObject *self, Py_buffer *view, int flags)
view->shape = NULL; view->shape = NULL;
} }
/* Ascertain that the new buffer has the same contiguity as the exporter */
if (ND_C_CONTIGUOUS(baseflags) != PyBuffer_IsContiguous(view, 'C') ||
/* skip cast to 1-d */
(view->format != NULL && view->shape != NULL &&
ND_FORTRAN_CONTIGUOUS(baseflags) != PyBuffer_IsContiguous(view, 'F')) ||
/* cast to 1-d */
(view->format == NULL && view->shape == NULL &&
!PyBuffer_IsContiguous(view, 'F'))) {
PyErr_SetString(PyExc_BufferError,
"ndarray: contiguity mismatch in getbuf()");
return -1;
}
view->obj = (PyObject *)self; view->obj = (PyObject *)self;
Py_INCREF(view->obj); Py_INCREF(view->obj);
self->head->exports++; self->head->exports++;
@ -2206,6 +2219,8 @@ ndarray_add_suboffsets(PyObject *self, PyObject *dummy)
for (i = 0; i < base->ndim; i++) for (i = 0; i < base->ndim; i++)
base->suboffsets[i] = -1; base->suboffsets[i] = -1;
nd->head->flags &= ~(ND_C|ND_FORTRAN);
Py_RETURN_NONE; Py_RETURN_NONE;
} }
@ -2469,13 +2484,12 @@ arraycmp(const Py_ssize_t *a1, const Py_ssize_t *a2, const Py_ssize_t *shape,
{ {
Py_ssize_t i; Py_ssize_t i;
if (ndim == 1 && shape && shape[0] == 1) {
/* This is for comparing strides: For example, the array
[175], shape=[1], strides=[-5] is considered contiguous. */
return 1;
}
for (i = 0; i < ndim; i++) { for (i = 0; i < ndim; i++) {
if (shape && shape[i] <= 1) {
/* strides can differ if the dimension is less than 2 */
continue;
}
if (a1[i] != a2[i]) { if (a1[i] != a2[i]) {
return 0; return 0;
} }
@ -2555,30 +2569,35 @@ is_contiguous(PyObject *self, PyObject *args)
PyObject *obj; PyObject *obj;
PyObject *order; PyObject *order;
PyObject *ret = NULL; PyObject *ret = NULL;
Py_buffer view; Py_buffer view, *base;
char ord; char ord;
if (!PyArg_ParseTuple(args, "OO", &obj, &order)) { if (!PyArg_ParseTuple(args, "OO", &obj, &order)) {
return NULL; return NULL;
} }
if (PyObject_GetBuffer(obj, &view, PyBUF_FULL_RO) < 0) { ord = get_ascii_order(order);
PyErr_SetString(PyExc_TypeError, if (ord == CHAR_MAX) {
"is_contiguous: object does not implement the buffer "
"protocol");
return NULL; return NULL;
} }
ord = get_ascii_order(order); if (NDArray_Check(obj)) {
if (ord == CHAR_MAX) { /* Skip the buffer protocol to check simple etc. buffers directly. */
goto release; base = &((NDArrayObject *)obj)->head->base;
ret = PyBuffer_IsContiguous(base, ord) ? Py_True : Py_False;
}
else {
if (PyObject_GetBuffer(obj, &view, PyBUF_FULL_RO) < 0) {
PyErr_SetString(PyExc_TypeError,
"is_contiguous: object does not implement the buffer "
"protocol");
return NULL;
}
ret = PyBuffer_IsContiguous(&view, ord) ? Py_True : Py_False;
PyBuffer_Release(&view);
} }
ret = PyBuffer_IsContiguous(&view, ord) ? Py_True : Py_False;
Py_INCREF(ret); Py_INCREF(ret);
release:
PyBuffer_Release(&view);
return ret; return ret;
} }

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@ -367,16 +367,35 @@ _IsFortranContiguous(const Py_buffer *view)
Py_ssize_t sd, dim; Py_ssize_t sd, dim;
int i; int i;
if (view->ndim == 0) return 1; /* 1) len = product(shape) * itemsize
if (view->strides == NULL) return (view->ndim == 1); 2) itemsize > 0
3) len = 0 <==> exists i: shape[i] = 0 */
if (view->len == 0) return 1;
if (view->strides == NULL) { /* C-contiguous by definition */
/* Trivially F-contiguous */
if (view->ndim <= 1) return 1;
/* ndim > 1 implies shape != NULL */
assert(view->shape != NULL);
/* Effectively 1-d */
sd = 0;
for (i=0; i<view->ndim; i++) {
if (view->shape[i] > 1) sd += 1;
}
return sd <= 1;
}
/* strides != NULL implies both of these */
assert(view->ndim > 0);
assert(view->shape != NULL);
sd = view->itemsize; sd = view->itemsize;
if (view->ndim == 1) return (view->shape[0] == 1 ||
sd == view->strides[0]);
for (i=0; i<view->ndim; i++) { for (i=0; i<view->ndim; i++) {
dim = view->shape[i]; dim = view->shape[i];
if (dim == 0) return 1; if (dim > 1 && view->strides[i] != sd) {
if (view->strides[i] != sd) return 0; return 0;
}
sd *= dim; sd *= dim;
} }
return 1; return 1;
@ -388,16 +407,22 @@ _IsCContiguous(const Py_buffer *view)
Py_ssize_t sd, dim; Py_ssize_t sd, dim;
int i; int i;
if (view->ndim == 0) return 1; /* 1) len = product(shape) * itemsize
if (view->strides == NULL) return 1; 2) itemsize > 0
3) len = 0 <==> exists i: shape[i] = 0 */
if (view->len == 0) return 1;
if (view->strides == NULL) return 1; /* C-contiguous by definition */
/* strides != NULL implies both of these */
assert(view->ndim > 0);
assert(view->shape != NULL);
sd = view->itemsize; sd = view->itemsize;
if (view->ndim == 1) return (view->shape[0] == 1 ||
sd == view->strides[0]);
for (i=view->ndim-1; i>=0; i--) { for (i=view->ndim-1; i>=0; i--) {
dim = view->shape[i]; dim = view->shape[i];
if (dim == 0) return 1; if (dim > 1 && view->strides[i] != sd) {
if (view->strides[i] != sd) return 0; return 0;
}
sd *= dim; sd *= dim;
} }
return 1; return 1;